Biobb Model changelog

What’s new in version 4.0.1?

In version 4.1.0 new biobb_structure_checking 3.13.4 and minimum Python version 3.8.0

What’s new in version 4.0.1?

In version 4.0.1 new biobb_structure_checking 3.13.0

What’s new in version 4.0.0?

In version 4.0.0 new biobb_common 4.0.0

New features

  • All fix_… will execute dry runs producing an unmodified output file if no problem is detected

What’s new in version 3.9.0?

In version 3.9.0 new biobb_common 3.9.0

What’s new in version 3.8.1?

In version 3.8.1 new fix_pdb block.

New features

  • Adding new fix_pdb block (general)

What’s new in version 3.8.0?

In version 3.8.0 the dependency biobb_common has been updated to 3.8.1 version.

New features

  • Update to biobb_common 3.8.1 (general)
  • Update to biobb_structure_checking 3.10.1 (general)

What’s new in version 3.7.0?

In version 3.7.0 the dependency biobb_common has been updated to 3.7.0 version.

New features

  • Update to biobb_common 3.7.0 (general)
  • Update to biobb_structure_checking 3.8.5 (general)

What’s new in version 3.0.1?

In version 3.0.0 Python has been updated to version 3.7 and Biopython to version 1.76. Big changes in the documentation style and content. Finally a new conda installation recipe has been introduced.

New features

  • Update to Python 3.7 (general)
  • Update to Biopython 1.76 (general)
  • New conda installer (installation)
  • Adding type hinting for easier usage (API)
  • Deprecating os.path in favour of pathlib.path (modules)
  • New command line documentation (documentation)

Bug fixes

  • Replace container Quay.io badge (documentation)
  • Remove unused system and step arguments from command line causing execution errors (cli) #9
  • Remove system argument from commandline (cli)

Other changes

  • New documentation styles (documentation) #8